In the DRC, scientists from the
Institut National de Recherche Biomédicale (INRB)
began sequencing immediately, and sharing interpretation through multiple channels such as LinkedIn (see post to the right) and
Virological.
Scientists at the Central Public Health Laboratory (CPHL), Kampala - Uganda have also completed sequencing and shared data.
Sequence data from both countries is being shared in near real-time through
Pathoplexus.
It is thanks to these scientists doing good work and sharing it rapidly that I am able to aggregate and share the visuals here. Thank you!
159 sequences from the current outbreak are available
from 2 countries (Democratic Republic of the Congo and Uganda)
with a collection-to-release turnaround time range of 1 -58
days (median 30 days)
. Sequences from the current outbreak were submitted by Pathogen Genomic Lab, INRB (126), Central Public Health Laboratories, Uganda (19), Pathogen Genomic Lab (13), Charite Virology (1).
Sequence Authors 29 author groups
- Amuri-Aziza, Adrienne; Muswamba-Kayembe, Pauline-Chloé; Paku-Tshambu, Princesse; Cikaya-Kankolongo, Fiston; Ola-Mpumbe, Rilia; Luakanda-Ndelemo, Gradi; Paku-Tshambu, Princesse; Adroba-Tandele, Pascal; Berocan-Underos, Francois; Akil-Bandali, Prince; Lola-Loway, Marcel; Djemba-Fundji, Benjamin; Lumembe-Numbi, Raphael; Mapenzi-Kashali, Nelson; Bakambu-Nebape, Berkias; Tete-Sitra, Judith; Makangara-Cigolo, Jean-Claude; Sindani-Kavugho, Neema; Kimbonza, Servet; Wilkinson, Sam; Quick, Josh; Citenga, Andre; Ntumba-Tshitenge, Olga; Gumede, Nicksy; Lokilo-Lofiko, Emmanuel; Mukadi, Daniel; Ngandu, Christian; Mossoko, Mathias; Loman, Nick; Rambaut, Andrew; Ahuka-Mundeke, Steve; Ngandu, Christian; Mwamba, Dieudonne; Kinganda-Lusamaki, Eddy; Muyembe-Tamfum, Jean-Jacques; Akilimali, Pierre; Wawina-Bokalanga, Tony; Mbala-Kingebeni, Placide 30 sequences
- Kinganda-Lusamaki, Eddy; Amuri-Aziza, Adrienne; Paku-Tshambu, Princesse; Sindani-Kavugho, Neema; Akil-Bandali, Prince; Tete-Sitra, Judith; Adroba-Tandele, Pascal; Mapenzi-Kashali, Nelson; Luakanda-Ndelemo, Gradi; Muswamba-Kayembe, Pauline-Chloé; Cikaya-Kankolongo, Fiston; Ola-Mpumbe, Rilia; Berocan-Underos, Francois; Lola-Loway, Marcel; Djemba-Fundji, Benjamin; Lumembe-Numbi, Raphael; Bakambu-Nebape, Berkias; Makangara-Cigolo, Jean-Claude; Kimbonza, Servet; Wilkinson, Sam; Quick, Josh; Citenga, Andre; Ntumba-Tshitenge, Olga; Gumede, Nicksy; Lokilo-Lofiko, Emmanuel; Mukadi, Daniel; Ngandu, Christian; Mossoko, Mathias; Loman, Nick; Rambaut, Andrew; Ahuka-Mundeke, Steve; Ngandu, Christian; Mwamba, Dieudonne; Muyembe-Tamfum, Jean-Jacques; Akilimali, Pierre; Wawina-Bokalanga, Tony; Mbala-Kingebeni, Placide 30 sequences
- Sindani-Kavugho, Neema; Akil-Bandali, Prince; Adroba-Tandele, Pascal; Amuri-Aziza, Adrienne; Paku-Tshambu, Princesse; Mapenzi-Kashali, Nelson; Luakanda-Ndelemo, Gradi; Muswamba-Kayembe, Pauline-Chloé; Cikaya-Kankolongo, Fiston; Ola-Mpumbe, Rilia; Berocan-Underos, Francois; Lola-Loway, Marcel; Djemba-Fundji, Benjamin; Lumembe-Numbi, Raphael; Bakambu-Nebape, Berkias; Tete-Sitra, Judith; Makangara-Cigolo, Jean-Claude; Kimbonza, Servet; Wilkinson, Sam; Quick, Josh; Citenga, Andre; Ntumba-Tshitenge, Olga; Gumede, Nicksy; Lokilo-Lofiko, Emmanuel; Mukadi, Daniel; Ngandu, Christian; Mossoko, Mathias; Loman, Nick; Rambaut, Andrew; Ahuka-Mundeke, Steve; Ngandu, Christian; Mwamba, Dieudonne; Kinganda-Lusamaki, Eddy; Muyembe-Tamfum, Jean-Jacques; Akilimali, Pierre; Wawina-Bokalanga, Tony; Mbala-Kingebeni, Placide 27 sequences
- Ola-Mpumbe, Rilia; Amuri-Aziza, Adrienne; Luakanda-Ndelemo, Gradi; Paku-Tshambu, Princesse; Kinganda-Lusamaki, Eddy; Adroba-Tandele, Pascal; Muswamba-Kayembe, Pauline-Chloé; Berocan-Underos, Francois; Akil-Bandali, Prince; Lola-Loway, Marcel; Djemba-Fundji, Benjamin; Cikaya-Kankolongo, Fiston; Lumembe-Numbi, Raphael; Mapenzi-Kashali, Nelson; Bakambu-Nebape, Berkias; Tete-Sitra, Judith; Makangara-Cigolo, Jean-Claude; Sindani-Kavugho, Neema; Kimbonza, Servet; Wilkinson, Sam; Quick, Josh; Citenga, Andre; Ntumba-Tshitenge, Olga; Gumede, Nicksy; Lokilo-Lofiko, Emmanuel; Mukadi, Daniel; Ngandu, Christian; Mossoko, Mathias; Loman, Nick; Rambaut, Andrew; Ahuka-Mundeke, Steve; Ngandu, Christian; Mwamba, Dieudonne; Muyembe-Tamfum, Jean-Jacques; Akilimali, Pierre; Wawina-Bokalanga, Tony; Mbala-Kingebeni, Placide 20 sequences
- Kinganda-Lusamaki, Eddy; Amuri-Aziza, Adrienne; Paku-Tshambu, Princesse; Luakanda-Ndelemo, Gradi; Tibasima-Dhessa, Liévin; Adroba-Tandele, Pascal; Muswamba-Kayembe, Pauline-Chloé; Bamaraki-Byaruhanga, Moise; Ola-Mpumbe, Rilia; Berocan-Underos, Francois; Akil-Bandali, Prince; Lola-Loway, Marcel; Djemba-Fundji, Benjamin; Cikaya-Kankolongo, Fiston; Lumembe-Numbi, Raphael; Mapenzi-Kashali, Nelson; Bakambu-Nebape, Berkias; Tete-Sitra, Judith; Makangara-Cigolo, Jean-Claude; Sindani-Kavugho, Neema; Kimbonza, Servet; Wilkinson, Sam; Quick, Josh; Citenga, Andre; Ntumba-Tshitenge, Olga; Gumede, Nicksy; Lokilo-Lofiko, Emmanuel; Mukadi, Daniel; Ngandu, Christian; Mossoko, Mathias; Loman, Nick; Rambaut, Andrew; Ahuka-Mundeke, Steve; Ngandu, Christian; Tanui-Kipngetich, Collins; Tessema-Kifle, Sofonias; Tebeje-Kebede, Yenew; Mwamba, Dieudonne; Muyembe-Tamfum, Jean-Jacques; Akilimali, Pierre; Wawina-Bokalanga, Tony; Mbala-Kingebeni, Placide 18 sequences
- Kanyerezi, Stephen; Ayitewala, Alisen; Nsawotebba, Andrew; Oundo, Hellen Rosette; Sseruyange, Julius; Tenywa, Wilson; Tusabe, Godwin; Murungi, Moses; Nakintu, Valeria; Makoha, Caroline; Kabahita, Jupiter Marina; Mugerwa, Ibrahim; Ddumba, Francis Semakuba; Mbambu, Alice; Namakula, Shakirah; Kagirita, Atek; Lubwama, Benard; Eilu, Roggers Michael; Otita, Morgan; Giduddu, Samuel; Ssemaganda, Aloysious; Nabadda, Susan; Ssewanyana, Isaac 14 sequences
- Hulseberg, C. E.; Kumar, R.; Larson, P.; DiPaola, N.; Richardson, J.; Hanson, J.; Wauquier, N.; Fair, J. N.; Makuwa, M.; Mulembakani, P.; Tamfun, J.-J.; Schoepp, R. J.; Sanchez-Lockhart, M.; Palacios, G. F.; Kuhn, J. H.; Kugelman, J. R.; Tamfun, J. J. M. 11 sequences
- Amuri-Aziza, Adrienne; Adroba-Tandele, Pascal; Luakanda-Ndelemo, Gradi; Kinganda-Lusamaki, Eddy; Lola-Loway, Marcel; Djemba-Fundji, Benjamin; Ola-Mpumbe, Rilia; Cikaya-Kankolongo, Fiston; Paku-Tshambu, Princesse; Muswamba-Kayembe, Pauline-Chloé; Lumembe-Numbi, Raphael; Mapenzi-Kashali, Nelson; Tete-Sitra, Judith; Makangara-Cigolo, Jean-Claude; Akil-Bandali, Prince; Kimbonza, Servet; Wilkinson, Sam; Quick, Josh; Citenga, Andre; Ntumba-Tshitenge, Olga; Lokilo-Lofiko, Emmanuel; Mukadi, Daniel; Jansen, Daan; Vercauteren, Koen; Ngandu, Christian; Mossoko, Mathias; Loman, Nick; Rambaut, Andrew; Mwamba, Dieudonne; Ahuka-Mundeke, Steve; Muyembe-Tamfum, Jean-Jacques; Wawina-Bokalanga, Tony; Mbala-Kingebeni, Placide 6 sequences
- Hulseberg, C. E.; Kumar, R.; Larson, P.; DiPaola, N.; Richardson, J.; Hanson, J.; Wauquier, N.; Fair, J. N.; Makuwa, M.; Mulembakani, P.; Tamfun, J.-J.; Schoepp, R. J.; Sanchez-Lockhart, M.; Palacios, G. F.; Kuhn, J. H.; Kugelman, J. R.; Malembakani, P.; Tamfun, J. J. M. 6 sequences
- Luakanda-Ndelemo, Gradi; Amuri-Aziza, Adrienne; Jansen, Daan; Ola-Mpumbe, Rilia; Paku-Tshambu, Princesse; Kinganda-Lusamaki, Eddy; Adroba-Tandele, Pascal; Akil-Bandali, Prince; Lola-Loway, Marcel; Djemba-Fundji, Benjamin; Cikaya-Kankolongo, Fiston; Muswamba-Kayembe, Pauline-Chloé; Lumembe-Numbi, Raphael; Mapenzi-Kashali, Nelson; Tete-Sitra, Judith; Makangara-Cigolo, Jean-Claude; Kimbonza, Servet; Wilkinson, Sam; Quick, Josh; Citenga, Andre; Ntumba-Tshitenge, Olga; Gumede, Nicksy; Lokilo-Lofiko, Emmanuel; Mukadi, Daniel; Vercauteren, Koen; Ngandu, Christian; Mossoko, Mathias; Loman, Nick; Rambaut, Andrew; Ahuka-Mundeke, Steve; Ngandu, Christian; Mwamba, Dieudonne; Muyembe-Tamfum, Jean-Jacques; Akilimali, Pierre; Wawina-Bokalanga, Tony; Mbala-Kingebeni, Placide 6 sequences
- Steigerwald, R. 6 sequences
- Albarino, C. G.; Shoemaker, T.; Khristova, M. L.; Wamala, J. F.; Muyembe, J. J.; Balinandi, S.; Tumusiime, A.; Campbell, S.; Cannon, D.; Gibbons, A.; Bergeron, E.; Bird, B.; Dodd, K.; Spiropoulou, C.; Erickson, B. R.; Guerrero, L.; Knust, B.; Nichol, S. T.; Rollin, P. E.; Stroher, U.; Khristova, M. 4 sequences
- Kanyerezi, Stephen; Ayitewala, Alisen; Nsawotebba, Andrew; Oundo, Hellen Rosette; Sseruyange, Julius; Tenywa, Wilson; Tusabe, Godwin; Murungi, Moses; Nakintu, Valeria; Makoha, Caroline; Kabahita, Jupiter Marina; Mugerwa, Ibrahim; Ddumba, Francis Semakuba; Nsubuga, Moses Luutu; Mbambu, Alice; Namakula, Shakirah; Kagirita, Atek; Lubwama, Benard; Eilu, Roggers Michael; Otita, Morgan; Giduddu, Samuel; Ssemaganda, Aloysious; Nabadda, Susan; Ssewanyana, Isaac 4 sequences
- Vanatta, R. 3 sequences
- Amuri-Aziza, Adrienne; Adroba-Tandele, Pascal; Luakanda - Ndelemo, Gradi; Makangara-Cigolo, Jean-Claude; Muswamba-Kayembe, Chloe; Rilia, Ola; Akil-Bandali, Prince; Paku-Tshambu, Princesse; Wilkinson, Sam; Tshulo, Louis; Quick, Josh; Citenga, Andre; Ntumba-Tshitenge, Olga; Lokilo-Lofiko, Emmanuel; Cikaya-Kankolongo, Fiston; Kimbonza, Servet; Pukuta, Elisabeth; Mukadi, Daniel; Ngandu, Christian; Mossoko, Mathias; Kabamba -Lungenyi, Gabriel; Lumembe-Numbi, Raphael; Mabika-Bope, Elzedeck; Mukadi, Patrick; Pratt, Catherine; Mwamba, Dieudonne; Loman, Nick; Rambaut, Andrew; Kinganda-Lusamaki, Eddy; Wawina-Bokalanga, Tony; Mumba - Ngoyi, Dieudonne; Muyembe-Tamfum, Jean-Jacques; Ahuka-Mundeke, Steve; Mbala-Kingebeni, Placide 2 sequences
- Lopera, J. G.; Bradford, R.; Rashid, S.; Shifflett, J.; Towle, T.; Eskandarinezhad, S.; Bruce, C.; Frank, A.; Sohn, J.-W.; Benton, B. 2 sequences
- Towner, J. S.; Sealy, T. K.; Khristova, M. L.; Albarino, C. G.; Conlan, S.; Reeder, S. A.; Quan, P. L.; Lipkin, W. I.; Downing, R.; Tappero, J. W.; Okware, S.; Lutwama, J.; Bakamutumaho, B.; Kayiwa, J.; Comer, J. A.; Rollin, P. E.; Ksiazek, T. G.; Nichol, S. T.; Kayiwa, J. T. 2 sequences
- Bennett, R.; Hensley, L.; Tallon, L.; Sadzewicz, L.; Vavikolanu, K.; Mehta, A.; Aluvathingal, J.; Nadendla, S.; Yan, Y.; Sichtig, H. 1 sequence
- Best, Till D.; Melchert, Julia; Mauno, Tiina; Zaki, Nikolai W.; Veith, Talitha; Bleicker, Tobias; Jones, Terry C.; Drosten, Christian; Corman, Victor M. 1 sequence
- Bruce, C. B.; Richards, K.; Easterbrook, L.; Pitman, J. K.; Burton, J. E.; Dowling, W.; Zhao, X.; Nagaraj, S.; Vavikolanu, K.; Nadendla, S.; Sadzewicz, L.; Tallon, L. J.; Sichtig, H. 1 sequence
- Bruce, C. B.; Richards, S. R.; Easterbrook, L.; Pitman, J. K.; Burton, J. E.; Dowling, W.; Zhao, X.; Nagaraj, S.; Vavikolanu, K.; Nadendla, S.; Sadzewicz, L.; Tallon, L.; Sichtig, H. 1 sequence
- Das, S. R.; Shabman, R.; Halpin, R. A.; Akopov, A.; Fedorova, N.; Puri, V.; Stockwell, T.; Amedeo, P.; Bishop, B.; Katzel, D.; Schobel, S.; Shrivastava, S.; Brasel, T.; Yun, N.; Paessler, S.; Dowling, W.; Barrett, A. 1 sequence
- Das, S. R.; Shabman, R.; Halpin, R. A.; Lin, X.; Ransier, A.; Fedorova, N.; Tsitrin, T.; Puri, V.; Stockwell, T.; Amedeo, P.; Bishop, B.; Gupta, N.; Katzel, D.; Schobel, S.; Shrivastava, S.; Alfson, K.; Wentworth, D. E.; Griffiths, A. 1 sequence
- Hulseberg, C. E.; Kumar, R.; Larson, P.; Di Paola, N.; Richardson, J.; Hanson, J.; Wauquier, N.; Fair, J. N.; Makuwa, M.; Mulembakani, P.; Tamfun, J.-J. M.; Schoepp, R. J.; Sanchez-Lockhart, M.; Palacios, G. F.; Kuhn, J. H.; Kugelman, J. R. 1 sequence
- Hulseberg, C. E.; Kumar, R.; Larson, P.; DiPaola, N.; Richardson, J.; Hanson, J.; Wauquier, N.; Fair, J. N.; Makuwa, M.; Mulembakani, P.; Tamfun, J.-J.; Schoepp, R. J.; Sanchez-Lockhart, M.; Palacios, G. F.; Kuhn, J. H.; Kugelman, J. R. 1 sequence
- Kanyerezi, Stephen; Ayitewala, Alisen; Nsawotebba, Andrew; Oundo, Hellen Rosette; Sseruyange, Julius; Tenywa, Wilson; Tusabe, Godwin; Murungi, Moses; Nakintu, Valeria; Makoha, Caroline; Kabahita, Jupiter Marina; Mugerwa, Ibrahim; Francis, Ddumba Semakuba; Kagirita, Atek; Lubwama, Benard; Eilu, Roggers Michael; Otita, Morgan; Giduddu, Samuel; Ssemaganda, Aloysious; Nabadda, Susan; Ssewanyana, Isaac 1 sequence
- Manuguerra, J.; Escadafal, C.; Kwasiborski, A.; Vanhomwegen, J. 1 sequence
- Minogue, T.; Rossi, C.; Wasieloski, L.; Coyne, S.; Olschner, S.; Kearney, B.; Schoepp, R.; Zhao, X.; Nagaraj, S.; Vavikolanu, K.; Nadendla, S.; Sadzewicz, L.; Tallon, L.; Sichtig, H. 1 sequence
- Towner, J. S.; Nichol, S. T.; Comer, J. A.; Ksiazek, T. G.; Rollin, P. E. 1 sequence